metadata

Introduction As researchers, we give presentations. Over the last years, I gave somewhere between 2 and 10 presentations a year. What I need is a html document that lists all my presentations, their title, date of presentation and a link to the pdf document in a table. This table can then be included on my institutional home page. As a plus, I want the table to be searchable and each column to be sortable. [Read More]

A colleague needed a table listing image ID, image filename, and number or ROIs for all images in a project. Here’s the python script I came up with: Query Metadata from omero Imports import omero from omero.gateway import BlitzGateway import pandas as pd import getpass Connect to omero conn = BlitzGateway('XXXXX', getpass.getpass(), host='omero.server.org') conn.connect() ········ True Retrieve datasets This sets up an iterator over the needed datasets but does not load any data into memory (yet). [Read More]